Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 AC079328.2-201ENST00000561241 3354 ntBASIC18.94■□□□□ 0.62
TRIM47Q96LD4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 AC119751.2-201ENST00000504529 210 ntBASIC18.93■□□□□ 0.62
TRIM47Q96LD4 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 AL512343.1-201ENST00000605837 169 ntBASIC18.93■□□□□ 0.62
TRIM47Q96LD4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 PCDHB19P-201ENST00000570871 2371 ntBASIC18.93■□□□□ 0.62
TRIM47Q96LD4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 AC092171.3-201ENST00000610122 2651 ntBASIC18.93■□□□□ 0.62
TRIM47Q96LD4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 SLC7A15P-201ENST00000424028 1363 ntBASIC18.93■□□□□ 0.62
TRIM47Q96LD4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM47Q96LD4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 AC073439.1-201ENST00000624121 1774 ntBASIC18.92■□□□□ 0.62
TRIM47Q96LD4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 TTTY23B-201ENST00000442790 549 ntBASIC18.92■□□□□ 0.62
TRIM47Q96LD4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 AL512361.1-201ENST00000554200 418 ntBASIC18.92■□□□□ 0.62
TRIM47Q96LD4 AC044860.1-202ENST00000559481 777 ntBASIC18.92■□□□□ 0.62
TRIM47Q96LD4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM47Q96LD4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms