Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 PCGF3-213ENST00000620529 1899 ntBASIC16.78■□□□□ 0.28
IFT43Q96FT9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 AL009183.1-201ENST00000603760 355 ntBASIC16.78■□□□□ 0.28
IFT43Q96FT9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.78■□□□□ 0.28
IFT43Q96FT9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IFT43Q96FT9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFT43Q96FT9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFT43Q96FT9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFT43Q96FT9 TSEN15P1-201ENST00000423257 515 ntBASIC16.77■□□□□ 0.28
IFT43Q96FT9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IFT43Q96FT9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IFT43Q96FT9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
IFT43Q96FT9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IFT43Q96FT9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IFT43Q96FT9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFT43Q96FT9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
IFT43Q96FT9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.77■□□□□ 0.27
IFT43Q96FT9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.77■□□□□ 0.27
IFT43Q96FT9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFT43Q96FT9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFT43Q96FT9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
IFT43Q96FT9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IFT43Q96FT9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.77■□□□□ 0.27
IFT43Q96FT9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.77■□□□□ 0.27
IFT43Q96FT9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
IFT43Q96FT9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
IFT43Q96FT9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 AC004461.1-201ENST00000412461 403 ntBASIC16.76■□□□□ 0.27
IFT43Q96FT9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 AC109635.5-201ENST00000533593 962 ntBASIC16.76■□□□□ 0.27
IFT43Q96FT9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 AC092384.3-202ENST00000564646 2873 ntBASIC16.76■□□□□ 0.27
IFT43Q96FT9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 ME2P1-201ENST00000426028 1970 ntBASIC16.76■□□□□ 0.27
IFT43Q96FT9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
IFT43Q96FT9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IFT43Q96FT9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms