Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 AC002472.2-201ENST00000442739 958 ntBASIC13.4□□□□□ -0.26
TREML4Q6UXN2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 AC083964.1-201ENST00000607549 630 ntBASIC13.4□□□□□ -0.26
TREML4Q6UXN2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 AL805961.1-202ENST00000641562 540 ntBASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TREML4Q6UXN2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
TREML4Q6UXN2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
TREML4Q6UXN2 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 HLA-V-201ENST00000429037 534 ntBASIC13.39□□□□□ -0.27
TREML4Q6UXN2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 TSPY16P-201ENST00000449843 468 ntBASIC13.39□□□□□ -0.27
TREML4Q6UXN2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 ADAM3B-201ENST00000569937 840 ntBASIC13.39□□□□□ -0.27
TREML4Q6UXN2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.39□□□□□ -0.27
TREML4Q6UXN2 AC068137.2-201ENST00000605408 478 ntBASIC13.39□□□□□ -0.27
TREML4Q6UXN2 GGTLC5P-201ENST00000617623 998 ntBASIC13.39□□□□□ -0.27
TREML4Q6UXN2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TREML4Q6UXN2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms