Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 RNA5SP410-201ENST00000516285 106 ntBASIC17.28■□□□□ 0.36
VSTM1Q6UX27 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 AL390955.2-201ENST00000603032 514 ntBASIC17.28■□□□□ 0.36
VSTM1Q6UX27 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.28■□□□□ 0.36
VSTM1Q6UX27 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.28■□□□□ 0.36
VSTM1Q6UX27 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 RNA5SP421-201ENST00000516864 134 ntBASIC17.27■□□□□ 0.36
VSTM1Q6UX27 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 SPCS2P1-201ENST00000561636 679 ntBASIC17.27■□□□□ 0.36
VSTM1Q6UX27 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VSTM1Q6UX27 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
VSTM1Q6UX27 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AL096865.1-201ENST00000606796 927 ntBASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 FO538757.1-201ENST00000623083 1397 ntBASIC17.26■□□□□ 0.35
VSTM1Q6UX27 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VSTM1Q6UX27 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms