Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.76□□□□□ -0.21
SSBP1Q04837 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.76□□□□□ -0.21
SSBP1Q04837 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SSBP1Q04837 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
SSBP1Q04837 BX276092.5-203ENST00000456199 560 ntBASIC13.76□□□□□ -0.21
SSBP1Q04837 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.76□□□□□ -0.21
SSBP1Q04837 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.76□□□□□ -0.21
SSBP1Q04837 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.76□□□□□ -0.21
SSBP1Q04837 AL022326.1-202ENST00000641533 845 ntBASIC13.76□□□□□ -0.21
SSBP1Q04837 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 OR2I1P-210ENST00000642037 4691 ntBASIC13.76□□□□□ -0.21
SSBP1Q04837 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SSBP1Q04837 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.76□□□□□ -0.21
SSBP1Q04837 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SSBP1Q04837 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SSBP1Q04837 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.75□□□□□ -0.21
SSBP1Q04837 NSUN5P1-202ENST00000421140 1535 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP1Q04837 NSUN5P2-203ENST00000457352 1529 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.75□□□□□ -0.21
SSBP1Q04837 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP1Q04837 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP1Q04837 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP1Q04837 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SSBP1Q04837 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP1Q04837 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
SSBP1Q04837 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SSBP1Q04837 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.75□□□□□ -0.21
SSBP1Q04837 KRT17P6-201ENST00000453795 1220 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 AL136038.3-201ENST00000561909 1096 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 AC064862.7-201ENST00000604520 867 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 AL365330.1-201ENST00000607459 531 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SSBP1Q04837 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP1Q04837 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.75□□□□□ -0.21
SSBP1Q04837 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP1Q04837 C18orf15-201ENST00000623680 2534 ntBASIC13.75□□□□□ -0.21
SSBP1Q04837 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP1Q04837 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP1Q04837 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SSBP1Q04837 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP1Q04837 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SSBP1Q04837 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
SSBP1Q04837 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP1Q04837 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP1Q04837 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP1Q04837 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms