Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA4AP68366 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA4AP68366 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.3■□□□□ 0.04
TUBA4AP68366 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA4AP68366 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA4AP68366 RBM17P3-201ENST00000417687 1192 ntBASIC15.3■□□□□ 0.04
TUBA4AP68366 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TUBA4AP68366 FAAHP1-202ENST00000446499 1238 ntBASIC15.3■□□□□ 0.04
TUBA4AP68366 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBA4AP68366 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA4AP68366 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.3■□□□□ 0.04
TUBA4AP68366 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBA4AP68366 NKAPP1-205ENST00000585790 367 ntBASIC15.3■□□□□ 0.04
TUBA4AP68366 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA4AP68366 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 AC148477.5-201ENST00000625164 1645 ntBASIC15.3■□□□□ 0.04
TUBA4AP68366 CICP14-201ENST00000629111 2732 ntBASIC15.3■□□□□ 0.04
TUBA4AP68366 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBA4AP68366 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA4AP68366 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TUBA4AP68366 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBA4AP68366 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBA4AP68366 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBA4AP68366 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBA4AP68366 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBA4AP68366 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TUBA4AP68366 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 CICP23-201ENST00000605013 2741 ntBASIC15.29■□□□□ 0.04
TUBA4AP68366 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TUBA4AP68366 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBA4AP68366 AC009078.2-202ENST00000463353 338 ntBASIC15.29■□□□□ 0.04
TUBA4AP68366 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.29■□□□□ 0.04
TUBA4AP68366 STK19B-204ENST00000512515 211 ntBASIC15.29■□□□□ 0.04
TUBA4AP68366 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 DUX4L17-201ENST00000557360 1267 ntBASIC15.29■□□□□ 0.04
TUBA4AP68366 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBA4AP68366 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBA4AP68366 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TUBA4AP68366 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBA4AP68366 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TUBA4AP68366 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TUBA4AP68366 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBA4AP68366 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.28■□□□□ 0.04
TUBA4AP68366 AL135999.2-201ENST00000622438 1686 ntBASIC15.28■□□□□ 0.04
TUBA4AP68366 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TUBA4AP68366 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms