Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.3□□□□□ -0.12
ATF1P18846 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ATF1P18846 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.3□□□□□ -0.12
ATF1P18846 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 AC073621.1-201ENST00000392730 636 ntBASIC14.3□□□□□ -0.12
ATF1P18846 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 KRT18P27-201ENST00000427733 1299 ntBASIC14.3□□□□□ -0.12
ATF1P18846 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.3□□□□□ -0.12
ATF1P18846 AC136632.2-201ENST00000512891 861 ntBASIC14.3□□□□□ -0.12
ATF1P18846 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.3□□□□□ -0.12
ATF1P18846 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.3□□□□□ -0.12
ATF1P18846 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 PGM5P2-202ENST00000637225 1043 ntBASIC14.3□□□□□ -0.12
ATF1P18846 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
ATF1P18846 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
ATF1P18846 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ATF1P18846 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 TMBIM7P-203ENST00000641617 1718 ntBASIC14.29□□□□□ -0.12
ATF1P18846 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.29□□□□□ -0.12
ATF1P18846 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ATF1P18846 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.29□□□□□ -0.12
ATF1P18846 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 RPS2P1-201ENST00000434010 821 ntBASIC14.29□□□□□ -0.12
ATF1P18846 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.29□□□□□ -0.12
ATF1P18846 AC073648.2-201ENST00000510116 352 ntBASIC14.29□□□□□ -0.12
ATF1P18846 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.29□□□□□ -0.12
ATF1P18846 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.29□□□□□ -0.12
ATF1P18846 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ATF1P18846 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ATF1P18846 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ATF1P18846 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATF1P18846 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.29□□□□□ -0.12
ATF1P18846 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms