Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AC021097.1-201ENST00000607902 574 ntBASIC15.11■□□□□ 0.01
PRKCAP17252 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.11■□□□□ 0.01
PRKCAP17252 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.11■□□□□ 0.01
PRKCAP17252 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRKCAP17252 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PRKCAP17252 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.11■□□□□ 0.01
PRKCAP17252 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRKCAP17252 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 PMS2P7-201ENST00000506558 1336 ntBASIC15.11■□□□□ 0.01
PRKCAP17252 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PRKCAP17252 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.11■□□□□ 0.01
PRKCAP17252 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRKCAP17252 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKCAP17252 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKCAP17252 AC092919.2-201ENST00000623631 1645 ntBASIC15.1■□□□□ 0.01
PRKCAP17252 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 GGT3P-204ENST00000453783 1664 ntBASIC15.1■□□□□ 0.01
PRKCAP17252 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.1■□□□□ 0.01
PRKCAP17252 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKCAP17252 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.1■□□□□ 0.01
PRKCAP17252 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.1■□□□□ 0.01
PRKCAP17252 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 AC109635.5-201ENST00000533593 962 ntBASIC15.1■□□□□ 0.01
PRKCAP17252 AC002347.1-201ENST00000569543 541 ntBASIC15.1■□□□□ 0.01
PRKCAP17252 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.1■□□□□ 0.01
PRKCAP17252 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
PRKCAP17252 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRKCAP17252 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PRKCAP17252 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.1■□□□□ 0.01
PRKCAP17252 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRKCAP17252 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKCAP17252 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKCAP17252 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKCAP17252 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKCAP17252 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PRKCAP17252 GPAA1P2-202ENST00000606848 1787 ntBASIC15.09■□□□□ 0.01
PRKCAP17252 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKCAP17252 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.09■□□□□ 0.01
PRKCAP17252 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PRKCAP17252 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PRKCAP17252 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKCAP17252 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.09■□□□□ 0.01
PRKCAP17252 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
PRKCAP17252 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.09■□□□□ 0.01
PRKCAP17252 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PRKCAP17252 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms