Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.75■□□□□ 0.11
CCNYL3P0C7X3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNYL3P0C7X3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNYL3P0C7X3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CCNYL3P0C7X3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCNYL3P0C7X3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 FO538757.1-201ENST00000623083 1397 ntBASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCNYL3P0C7X3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 TREML5P-201ENST00000421694 576 ntBASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 AC105233.2-201ENST00000523697 349 ntBASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 AF228730.5-201ENST00000530288 346 ntBASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 AC190387.1-201ENST00000551683 408 ntBASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCNYL3P0C7X3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 AC092171.3-201ENST00000610122 2651 ntBASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 PCDHB17P-201ENST00000539533 2393 ntBASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
CCNYL3P0C7X3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms