Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 AC090340.1-201ENST00000620778 4980 ntBASIC19.41■□□□□ 0.7
CHGBP05060 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.41■□□□□ 0.7
CHGBP05060 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.41■□□□□ 0.7
CHGBP05060 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.41■□□□□ 0.7
CHGBP05060 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.41■□□□□ 0.7
CHGBP05060 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.41■□□□□ 0.7
CHGBP05060 AC004890.2-204ENST00000481968 304 ntBASIC19.41■□□□□ 0.7
CHGBP05060 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.41■□□□□ 0.7
CHGBP05060 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.41■□□□□ 0.7
CHGBP05060 SPCS2P1-201ENST00000561636 679 ntBASIC19.41■□□□□ 0.7
CHGBP05060 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.41■□□□□ 0.7
CHGBP05060 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.41■□□□□ 0.7
CHGBP05060 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
CHGBP05060 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHGBP05060 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.41■□□□□ 0.7
CHGBP05060 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.41■□□□□ 0.7
CHGBP05060 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHGBP05060 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.4■□□□□ 0.7
CHGBP05060 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.4■□□□□ 0.7
CHGBP05060 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.4■□□□□ 0.7
CHGBP05060 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.4■□□□□ 0.7
CHGBP05060 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.4■□□□□ 0.7
CHGBP05060 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CHGBP05060 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.4■□□□□ 0.7
CHGBP05060 AC009407.1-201ENST00000568958 598 ntBASIC19.4■□□□□ 0.7
CHGBP05060 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.4■□□□□ 0.7
CHGBP05060 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CHGBP05060 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 AC008894.3-201ENST00000624324 3103 ntBASIC19.4■□□□□ 0.7
CHGBP05060 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHGBP05060 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.4■□□□□ 0.7
CHGBP05060 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHGBP05060 AC069224.1-201ENST00000566372 1715 ntBASIC19.39■□□□□ 0.7
CHGBP05060 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHGBP05060 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CHGBP05060 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHGBP05060 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CHGBP05060 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.39■□□□□ 0.69
CHGBP05060 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.39■□□□□ 0.69
CHGBP05060 LINC02447-202ENST00000501888 2146 ntBASIC19.39■□□□□ 0.69
CHGBP05060 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHGBP05060 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CHGBP05060 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CHGBP05060 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 HLA-V-204ENST00000476601 1289 ntBASIC19.39■□□□□ 0.69
CHGBP05060 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.39■□□□□ 0.69
CHGBP05060 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.39■□□□□ 0.69
CHGBP05060 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 AL035456.1-201ENST00000456064 1369 ntBASIC19.39■□□□□ 0.69
CHGBP05060 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.39■□□□□ 0.69
CHGBP05060 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHGBP05060 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms