Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMP1P01033 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.29■□□□□ 0.36
TIMP1P01033 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMP1P01033 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.29■□□□□ 0.36
TIMP1P01033 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.29■□□□□ 0.36
TIMP1P01033 AC000095.1-201ENST00000603208 874 ntBASIC17.29■□□□□ 0.36
TIMP1P01033 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TIMP1P01033 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 AC138028.6-201ENST00000616106 1482 ntBASIC17.29■□□□□ 0.36
TIMP1P01033 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TIMP1P01033 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.29■□□□□ 0.36
TIMP1P01033 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.28■□□□□ 0.36
TIMP1P01033 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.28■□□□□ 0.36
TIMP1P01033 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.28■□□□□ 0.36
TIMP1P01033 AC004898.1-201ENST00000451057 766 ntBASIC17.28■□□□□ 0.36
TIMP1P01033 AC026410.3-201ENST00000514280 936 ntBASIC17.28■□□□□ 0.36
TIMP1P01033 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TIMP1P01033 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.28■□□□□ 0.36
TIMP1P01033 AC015967.2-201ENST00000624092 234 ntBASIC17.28■□□□□ 0.36
TIMP1P01033 AC006435.4-201ENST00000625037 234 ntBASIC17.28■□□□□ 0.36
TIMP1P01033 AL356737.1-201ENST00000634391 234 ntBASIC17.28■□□□□ 0.36
TIMP1P01033 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.28■□□□□ 0.36
TIMP1P01033 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.28■□□□□ 0.36
TIMP1P01033 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TIMP1P01033 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TIMP1P01033 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
TIMP1P01033 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.27■□□□□ 0.36
TIMP1P01033 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.27■□□□□ 0.36
TIMP1P01033 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.36
TIMP1P01033 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.27■□□□□ 0.36
TIMP1P01033 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TIMP1P01033 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.27■□□□□ 0.36
TIMP1P01033 SCARNA20.5-201ENST00000516991 142 ntBASIC17.27■□□□□ 0.36
TIMP1P01033 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.27■□□□□ 0.36
TIMP1P01033 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.27■□□□□ 0.36
TIMP1P01033 AC016629.1-201ENST00000596579 586 ntBASIC17.27■□□□□ 0.36
TIMP1P01033 AC093813.1-201ENST00000605066 256 ntBASIC17.27■□□□□ 0.36
TIMP1P01033 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.27■□□□□ 0.36
TIMP1P01033 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.27■□□□□ 0.36
TIMP1P01033 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.27■□□□□ 0.36
TIMP1P01033 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms