Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
PDE6DO43924 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
PDE6DO43924 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.64□□□□□ -0.39
PDE6DO43924 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
PDE6DO43924 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
PDE6DO43924 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 AC139749.1-202ENST00000617529 3139 ntBASIC12.63□□□□□ -0.39
PDE6DO43924 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
PDE6DO43924 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 SPDYE15P-201ENST00000424157 909 ntBASIC12.63□□□□□ -0.39
PDE6DO43924 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 AC098590.1-201ENST00000468126 897 ntBASIC12.63□□□□□ -0.39
PDE6DO43924 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.63□□□□□ -0.39
PDE6DO43924 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 AC005336.2-201ENST00000593183 939 ntBASIC12.63□□□□□ -0.39
PDE6DO43924 AC010947.1-201ENST00000623454 693 ntBASIC12.63□□□□□ -0.39
PDE6DO43924 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.63□□□□□ -0.39
PDE6DO43924 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 AC008677.1-201ENST00000519230 1561 ntBASIC12.63□□□□□ -0.39
PDE6DO43924 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
PDE6DO43924 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
PDE6DO43924 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
PDE6DO43924 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
PDE6DO43924 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
PDE6DO43924 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
PDE6DO43924 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 CYP2D8P-201ENST00000433633 1490 ntBASIC12.62□□□□□ -0.39
PDE6DO43924 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC12.62□□□□□ -0.39
PDE6DO43924 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.62□□□□□ -0.39
PDE6DO43924 AC011840.4-201ENST00000578471 627 ntBASIC12.62□□□□□ -0.39
PDE6DO43924 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.62□□□□□ -0.39
PDE6DO43924 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
PDE6DO43924 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
PDE6DO43924 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.62□□□□□ -0.39
PDE6DO43924 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
PDE6DO43924 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms