Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.08■□□□□ 0.32
CLDN5O00501 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLDN5O00501 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLDN5O00501 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN5O00501 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 CYP4F24P-201ENST00000586049 1580 ntBASIC17.07■□□□□ 0.32
CLDN5O00501 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
CLDN5O00501 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN5O00501 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN5O00501 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLDN5O00501 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.07■□□□□ 0.32
CLDN5O00501 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLDN5O00501 AL512638.1-201ENST00000457493 794 ntBASIC17.07■□□□□ 0.32
CLDN5O00501 AC004890.2-204ENST00000481968 304 ntBASIC17.07■□□□□ 0.32
CLDN5O00501 RNA5SP421-201ENST00000516864 134 ntBASIC17.07■□□□□ 0.32
CLDN5O00501 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.07■□□□□ 0.32
CLDN5O00501 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.07■□□□□ 0.32
CLDN5O00501 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.07■□□□□ 0.32
CLDN5O00501 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLDN5O00501 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN5O00501 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 CROCCP1-201ENST00000426910 5675 ntBASIC17.06■□□□□ 0.32
CLDN5O00501 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLDN5O00501 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 AL691432.1-201ENST00000596308 1422 ntBASIC17.06■□□□□ 0.32
CLDN5O00501 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN5O00501 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.06■□□□□ 0.32
CLDN5O00501 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.06■□□□□ 0.32
CLDN5O00501 FAM8A3P-201ENST00000427218 844 ntBASIC17.06■□□□□ 0.32
CLDN5O00501 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN5O00501 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN5O00501 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN5O00501 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN5O00501 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.06■□□□□ 0.32
CLDN5O00501 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLDN5O00501 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.06■□□□□ 0.32
CLDN5O00501 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLDN5O00501 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN5O00501 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLDN5O00501 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.05■□□□□ 0.32
CLDN5O00501 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLDN5O00501 MIR661-201ENST00000384842 89 ntBASIC17.05■□□□□ 0.32
CLDN5O00501 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.05■□□□□ 0.32
CLDN5O00501 MRPS18AP1-201ENST00000414458 589 ntBASIC17.05■□□□□ 0.32
CLDN5O00501 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN5O00501 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.05■□□□□ 0.32
CLDN5O00501 AL844908.2-201ENST00000609461 460 ntBASIC17.05■□□□□ 0.32
CLDN5O00501 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.05■□□□□ 0.32
CLDN5O00501 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms