Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 AC006449.6-201ENST00000612330 2296 ntBASIC15.24■□□□□ 0.03
CLCA1A8K7I4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 AL355385.1-201ENST00000606123 409 ntBASIC15.24■□□□□ 0.03
CLCA1A8K7I4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLCA1A8K7I4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 GGT3P-204ENST00000453783 1664 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 AC211486.1-202ENST00000416371 468 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 AL513480.1-201ENST00000451731 511 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ALG1L5P-201ENST00000482043 771 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 AC211476.1-201ENST00000503899 468 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 AC005829.1-201ENST00000570002 483 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ACTL9-202ENST00000612068 1252 ntBASIC15.23■□□□□ 0.03
CLCA1A8K7I4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLCA1A8K7I4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 AC006058.4-201ENST00000624016 1670 ntBASIC15.22■□□□□ 0.03
CLCA1A8K7I4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms