Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 DBET-201ENST00000630918 3363 ntBASIC14.56□□□□□ -0.08
TVP23AA6NH52 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.56□□□□□ -0.08
TVP23AA6NH52 PRSS29P-201ENST00000440800 595 ntBASIC14.56□□□□□ -0.08
TVP23AA6NH52 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 AL031432.2-201ENST00000566714 459 ntBASIC14.56□□□□□ -0.08
TVP23AA6NH52 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 AL928711.1-201ENST00000570165 459 ntBASIC14.56□□□□□ -0.08
TVP23AA6NH52 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TVP23AA6NH52 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TVP23AA6NH52 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 AC069224.1-201ENST00000566372 1715 ntBASIC14.55□□□□□ -0.08
TVP23AA6NH52 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 IGLL3P-201ENST00000412472 434 ntBASIC14.55□□□□□ -0.08
TVP23AA6NH52 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 VN2R19P-201ENST00000442399 1052 ntBASIC14.55□□□□□ -0.08
TVP23AA6NH52 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.55□□□□□ -0.08
TVP23AA6NH52 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 UNC93B6-202ENST00000528242 690 ntBASIC14.55□□□□□ -0.08
TVP23AA6NH52 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 AP002469.2-201ENST00000531724 424 ntBASIC14.55□□□□□ -0.08
TVP23AA6NH52 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 AC116407.3-201ENST00000623905 1129 ntBASIC14.55□□□□□ -0.08
TVP23AA6NH52 AL645728.2-201ENST00000641974 660 ntBASIC14.55□□□□□ -0.08
TVP23AA6NH52 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TVP23AA6NH52 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms