Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 AC087499.6-201ENST00000411576 835 ntBASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 NME2P1-201ENST00000426182 414 ntBASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 CR383656.12-201ENST00000549567 513 ntBASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TBC1D3FA6NER0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 DFFBP1-201ENST00000433250 979 ntBASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 API5-211ENST00000534695 560 ntTSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 AC140912.1-201ENST00000577171 1054 ntBASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 AL109936.8-201ENST00000641772 604 ntBASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 AL136982.4-201ENST00000437689 1740 ntBASIC16.11■□□□□ 0.17
TBC1D3FA6NER0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AC022211.2-201ENST00000585075 2527 ntBASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AC106886.4-201ENST00000623557 2502 ntBASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 GK-202ENST00000378941 458 ntTSL 3 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AC114501.2-201ENST00000439631 535 ntBASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms