Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC010326.4-201ENST00000604665 891 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC013467.2-201ENST00000605472 835 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC006277.1-201ENST00000624348 1610 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC006486.2-201ENST00000624246 2199 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 AC040160.2-201ENST00000623816 1675 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RET-205ENST00000615310 4337 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 TMBIM7P-203ENST00000641617 1718 ntBASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LCE3DQ9BYE3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 AL353692.3-201ENST00000407031 1396 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 AL049757.1-201ENST00000616842 1596 ntBASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.7
LCE3DQ9BYE3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms