Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.74■□□□□ 0.27
CSPG4P5Q96PW8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSPG4P5Q96PW8 PAUPAR-201ENST00000630360 2965 ntBASIC16.74■□□□□ 0.27
CSPG4P5Q96PW8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.74■□□□□ 0.27
CSPG4P5Q96PW8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.74■□□□□ 0.27
CSPG4P5Q96PW8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 RNA5SP410-201ENST00000516285 106 ntBASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 AC092865.5-201ENST00000545435 363 ntBASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CSPG4P5Q96PW8 AC132872.4-202ENST00000622924 2756 ntBASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 HLA-H-201ENST00000383620 1096 ntBASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 AC004461.1-201ENST00000412461 403 ntBASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CSPG4P5Q96PW8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 AP005117.1-202ENST00000581724 1908 ntBASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 AC005237.2-201ENST00000434368 219 ntBASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 AC093520.2-201ENST00000561830 333 ntBASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.71■□□□□ 0.27
CSPG4P5Q96PW8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms