Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 AC026979.3-201ENST00000607315 403 ntBASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 AC099568.2-201ENST00000609194 695 ntBASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 AL512652.2-201ENST00000625156 1716 ntBASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 SPDYE17-201ENST00000412399 783 ntBASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 AC004461.2-201ENST00000629517 803 ntBASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 FLJ38576-201ENST00000623820 2459 ntBASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC46A1Q96NT5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 AC011676.5-201ENST00000624864 2660 ntBASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 AL512343.1-201ENST00000605837 169 ntBASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC46A1Q96NT5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 AC009053.2-201ENST00000563701 2365 ntBASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC46A1Q96NT5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms