Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 TERC-201ENST00000602385 541 ntBASIC14.47□□□□□ -0.09
RFT1Q96AA3 AL022326.1-202ENST00000641533 845 ntBASIC14.47□□□□□ -0.09
RFT1Q96AA3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.47□□□□□ -0.09
RFT1Q96AA3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RFT1Q96AA3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 AC138035.3-201ENST00000622706 2791 ntBASIC14.46□□□□□ -0.09
RFT1Q96AA3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 LINC02447-202ENST00000501888 2146 ntBASIC14.46□□□□□ -0.09
RFT1Q96AA3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 MTDHP3-201ENST00000594186 672 ntBASIC14.46□□□□□ -0.09
RFT1Q96AA3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SBF1P1-201ENST00000444527 5631 ntBASIC14.46□□□□□ -0.09
RFT1Q96AA3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RFT1Q96AA3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 PCDHA3-202ENST00000532566 4594 ntBASIC14.46□□□□□ -0.09
RFT1Q96AA3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.46□□□□□ -0.09
RFT1Q96AA3 OR2I1P-209ENST00000641730 5365 ntBASIC14.46□□□□□ -0.09
RFT1Q96AA3 CDC14C-201ENST00000428251 1719 ntBASIC14.46□□□□□ -0.1
RFT1Q96AA3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RFT1Q96AA3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.46□□□□□ -0.1
RFT1Q96AA3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RFT1Q96AA3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 AC112504.1-201ENST00000623415 1841 ntBASIC14.45□□□□□ -0.1
RFT1Q96AA3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.45□□□□□ -0.1
RFT1Q96AA3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFT1Q96AA3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms