Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC012640.2-201ENST00000561606 901 ntBASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 AC005593.1-201ENST00000624894 515 ntBASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 FAM215A-202ENST00000632077 792 ntBASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTN4IP1Q8WWV3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 AP002414.3-201ENST00000589352 1468 ntBASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 AL031284.1-201ENST00000419297 478 ntBASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 AC008667.4-201ENST00000607370 168 ntBASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 AC112504.1-201ENST00000623415 1841 ntBASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RTN4IP1Q8WWV3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 MRPL3P1-201ENST00000400109 1033 ntBASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AL662844.1-201ENST00000546340 181 ntBASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RTN4IP1Q8WWV3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms