Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AC006538.1-201ENST00000567905 1585 ntBASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 SERBP1P3-201ENST00000459980 809 ntBASIC16.52■□□□□ 0.24
CHPFQ8IZ52 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 AC004840.1-201ENST00000636359 365 ntBASIC16.52■□□□□ 0.24
CHPFQ8IZ52 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.52■□□□□ 0.24
CHPFQ8IZ52 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 BTBD7P1-201ENST00000447253 1453 ntBASIC16.52■□□□□ 0.23
CHPFQ8IZ52 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.52■□□□□ 0.23
CHPFQ8IZ52 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.51■□□□□ 0.23
CHPFQ8IZ52 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CR383656.12-201ENST00000549567 513 ntBASIC16.51■□□□□ 0.23
CHPFQ8IZ52 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.51■□□□□ 0.23
CHPFQ8IZ52 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHPFQ8IZ52 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 PCGF3-213ENST00000620529 1899 ntBASIC16.5■□□□□ 0.23
CHPFQ8IZ52 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHPFQ8IZ52 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms