Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.31■□□□□ 0.36
VSTM1Q6UX27 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 MIR943-201ENST00000401286 94 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AL353705.2-201ENST00000428243 662 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AC055876.3-201ENST00000431496 288 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AC011467.4-201ENST00000594891 528 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AL158211.3-201ENST00000607385 239 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AC138649.4-201ENST00000612222 287 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AL589702.1-201ENST00000641229 1509 ntBASIC17.3■□□□□ 0.36
VSTM1Q6UX27 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VSTM1Q6UX27 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 ALOX12P2-203ENST00000570921 1945 ntBASIC17.29■□□□□ 0.36
VSTM1Q6UX27 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AC069120.2-201ENST00000524091 540 ntBASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AC024267.1-201ENST00000582320 895 ntBASIC17.29■□□□□ 0.36
VSTM1Q6UX27 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AC003101.2-201ENST00000612557 442 ntBASIC17.29■□□□□ 0.36
VSTM1Q6UX27 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.29■□□□□ 0.36
VSTM1Q6UX27 AL035456.1-201ENST00000456064 1369 ntBASIC17.28■□□□□ 0.36
VSTM1Q6UX27 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VSTM1Q6UX27 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms