Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC27Q2M243 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC27Q2M243 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 AL079307.3-201ENST00000556114 283 ntBASIC21.03■□□□□ 0.96
CCDC27Q2M243 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 AC004449.1-201ENST00000564240 433 ntBASIC21.03■□□□□ 0.96
CCDC27Q2M243 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC27Q2M243 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC27Q2M243 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 AL080243.2-201ENST00000418783 582 ntBASIC21.02■□□□□ 0.96
CCDC27Q2M243 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 HLA-V-204ENST00000476601 1289 ntBASIC21.02■□□□□ 0.96
CCDC27Q2M243 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 AC067863.1-201ENST00000494933 530 ntBASIC21.02■□□□□ 0.96
CCDC27Q2M243 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 SUOX-214ENST00000551841 906 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 REXO1L1P-202ENST00000608646 1974 ntBASIC21.02■□□□□ 0.96
CCDC27Q2M243 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC27Q2M243 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC27Q2M243 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC27Q2M243 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CCDC27Q2M243 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 FO393414.2-201ENST00000405153 598 ntBASIC21.01■□□□□ 0.95
CCDC27Q2M243 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 KLF2P3-201ENST00000451977 1087 ntBASIC21.01■□□□□ 0.95
CCDC27Q2M243 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC27Q2M243 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC27Q2M243 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms