Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL10A1Q03692 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL10A1Q03692 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL10A1Q03692 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL10A1Q03692 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL10A1Q03692 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.78□□□□□ -0.2
COL10A1Q03692 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.78□□□□□ -0.2
COL10A1Q03692 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL10A1Q03692 AC105917.1-201ENST00000506637 2539 ntBASIC13.78□□□□□ -0.2
COL10A1Q03692 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL10A1Q03692 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
COL10A1Q03692 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL10A1Q03692 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL10A1Q03692 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.77□□□□□ -0.21
COL10A1Q03692 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 MIR574-201ENST00000385209 96 ntBASIC13.77□□□□□ -0.21
COL10A1Q03692 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.77□□□□□ -0.21
COL10A1Q03692 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.77□□□□□ -0.21
COL10A1Q03692 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.77□□□□□ -0.21
COL10A1Q03692 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
COL10A1Q03692 AC112191.1-201ENST00000523689 701 ntBASIC13.77□□□□□ -0.21
COL10A1Q03692 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
COL10A1Q03692 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
COL10A1Q03692 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COL10A1Q03692 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.77□□□□□ -0.21
COL10A1Q03692 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
COL10A1Q03692 PKD1P5-201ENST00000532415 10291 ntBASIC13.77□□□□□ -0.21
COL10A1Q03692 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL10A1Q03692 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COL10A1Q03692 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.77□□□□□ -0.21
COL10A1Q03692 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 AC022188.1-201ENST00000620960 1664 ntBASIC13.76□□□□□ -0.21
COL10A1Q03692 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
COL10A1Q03692 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.76□□□□□ -0.21
COL10A1Q03692 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 POLD2P1-201ENST00000511220 997 ntBASIC13.76□□□□□ -0.21
COL10A1Q03692 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.76□□□□□ -0.21
COL10A1Q03692 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 AC040169.1-201ENST00000565382 521 ntBASIC13.76□□□□□ -0.21
COL10A1Q03692 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
COL10A1Q03692 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
COL10A1Q03692 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 LINC02228-204ENST00000642115 2962 ntBASIC13.76□□□□□ -0.21
COL10A1Q03692 U82695.1-201ENST00000635752 1889 ntBASIC13.76□□□□□ -0.21
COL10A1Q03692 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.76□□□□□ -0.21
COL10A1Q03692 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL10A1Q03692 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
COL10A1Q03692 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
COL10A1Q03692 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms