Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
GABREP78334 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 AC080080.1-201ENST00000625121 2420 ntBASIC15.39■□□□□ 0.05
GABREP78334 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 AC092053.1-201ENST00000605787 1936 ntBASIC15.39■□□□□ 0.05
GABREP78334 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 KRT43P-201ENST00000434019 910 ntBASIC15.39■□□□□ 0.05
GABREP78334 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
GABREP78334 BNIP3P42-201ENST00000454982 569 ntBASIC15.39■□□□□ 0.05
GABREP78334 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.39■□□□□ 0.05
GABREP78334 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.39■□□□□ 0.05
GABREP78334 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.39■□□□□ 0.05
GABREP78334 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.39■□□□□ 0.05
GABREP78334 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.39■□□□□ 0.05
GABREP78334 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.39■□□□□ 0.05
GABREP78334 AC092337.1-201ENST00000568699 1129 ntBASIC15.39■□□□□ 0.05
GABREP78334 BNIP3P29-201ENST00000598302 571 ntBASIC15.39■□□□□ 0.05
GABREP78334 AC074044.1-201ENST00000609673 707 ntBASIC15.39■□□□□ 0.05
GABREP78334 AC011447.5-201ENST00000616168 564 ntBASIC15.39■□□□□ 0.05
GABREP78334 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.39■□□□□ 0.05
GABREP78334 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
GABREP78334 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.39■□□□□ 0.05
GABREP78334 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.39■□□□□ 0.05
GABREP78334 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.39■□□□□ 0.05
GABREP78334 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GABREP78334 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.39■□□□□ 0.05
GABREP78334 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
GABREP78334 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.39■□□□□ 0.05
GABREP78334 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 NFIC-211ENST00000641145 8399 ntBASIC15.38■□□□□ 0.05
GABREP78334 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GABREP78334 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
GABREP78334 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GABREP78334 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.38■□□□□ 0.05
GABREP78334 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GABREP78334 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.38■□□□□ 0.05
GABREP78334 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.38■□□□□ 0.05
GABREP78334 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
GABREP78334 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
GABREP78334 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
GABREP78334 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
GABREP78334 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
GABREP78334 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GABREP78334 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
GABREP78334 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GABREP78334 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
GABREP78334 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
GABREP78334 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
GABREP78334 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms