Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA4AP68366 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TUBA4AP68366 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.33■□□□□ 0.04
TUBA4AP68366 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA4AP68366 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
TUBA4AP68366 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 KLF4P1-201ENST00000412782 1185 ntBASIC15.32■□□□□ 0.04
TUBA4AP68366 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 AL121912.1-201ENST00000603683 238 ntBASIC15.32■□□□□ 0.04
TUBA4AP68366 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 AP000867.4-201ENST00000641616 219 ntBASIC15.32■□□□□ 0.04
TUBA4AP68366 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 AL353593.2-201ENST00000602529 1483 ntBASIC15.32■□□□□ 0.04
TUBA4AP68366 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 PMPCAP1-201ENST00000508114 1576 ntBASIC15.32■□□□□ 0.04
TUBA4AP68366 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBA4AP68366 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBA4AP68366 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBA4AP68366 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA4AP68366 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TUBA4AP68366 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TUBA4AP68366 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA4AP68366 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TUBA4AP68366 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBA4AP68366 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TUBA4AP68366 SART3-203ENST00000546611 1184 ntBASIC15.31■□□□□ 0.04
TUBA4AP68366 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.31■□□□□ 0.04
TUBA4AP68366 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
TUBA4AP68366 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBA4AP68366 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TUBA4AP68366 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBA4AP68366 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms