Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.85□□□□□ -0.03
CXCR4P61073 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCR4P61073 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CXCR4P61073 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCR4P61073 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CXCR4P61073 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CXCR4P61073 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCR4P61073 PRYP5-201ENST00000451909 266 ntBASIC14.85□□□□□ -0.03
CXCR4P61073 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.85□□□□□ -0.03
CXCR4P61073 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CXCR4P61073 REXO1L3P-201ENST00000622202 1288 ntBASIC14.85□□□□□ -0.03
CXCR4P61073 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCR4P61073 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CXCR4P61073 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCR4P61073 AC005622.1-201ENST00000636801 1703 ntBASIC14.85□□□□□ -0.03
CXCR4P61073 LINC00528-201ENST00000600723 2160 ntBASIC14.85□□□□□ -0.03
CXCR4P61073 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CXCR4P61073 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CXCR4P61073 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.85□□□□□ -0.03
CXCR4P61073 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CXCR4P61073 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CXCR4P61073 AC105250.1-201ENST00000509378 2057 ntBASIC14.85□□□□□ -0.03
CXCR4P61073 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CXCR4P61073 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCR4P61073 PAWRP1-201ENST00000451083 565 ntBASIC14.84□□□□□ -0.03
CXCR4P61073 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.84□□□□□ -0.03
CXCR4P61073 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 AP001269.4-201ENST00000609611 512 ntBASIC14.84□□□□□ -0.03
CXCR4P61073 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CXCR4P61073 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CXCR4P61073 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CXCR4P61073 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CXCR4P61073 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.84□□□□□ -0.03
CXCR4P61073 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 U82695.1-201ENST00000635752 1889 ntBASIC14.84□□□□□ -0.03
CXCR4P61073 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 AC090616.6-203ENST00000579186 1945 ntBASIC14.84□□□□□ -0.03
CXCR4P61073 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CXCR4P61073 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CXCR4P61073 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.03
CXCR4P61073 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CXCR4P61073 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CXCR4P61073 AL359258.3-201ENST00000622910 2331 ntBASIC14.83□□□□□ -0.03
CXCR4P61073 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.83□□□□□ -0.03
CXCR4P61073 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CXCR4P61073 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CXCR4P61073 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CXCR4P61073 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.83□□□□□ -0.03
CXCR4P61073 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCR4P61073 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CXCR4P61073 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCR4P61073 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CXCR4P61073 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCR4P61073 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CXCR4P61073 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCR4P61073 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CXCR4P61073 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCR4P61073 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.83□□□□□ -0.04
CXCR4P61073 AC132008.2-207ENST00000454517 770 ntBASIC14.83□□□□□ -0.04
CXCR4P61073 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCR4P61073 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.83□□□□□ -0.04
CXCR4P61073 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.83□□□□□ -0.04
CXCR4P61073 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms