Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6CP48668 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6CP48668 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6CP48668 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
KRT6CP48668 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6CP48668 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6CP48668 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
KRT6CP48668 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRT6CP48668 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.83■□□□□ 0.12
KRT6CP48668 HYMAI-201ENST00000635591 3347 ntBASIC15.83■□□□□ 0.12
KRT6CP48668 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.82■□□□□ 0.12
KRT6CP48668 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 LINC02447-202ENST00000501888 2146 ntBASIC15.82■□□□□ 0.12
KRT6CP48668 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
KRT6CP48668 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.82■□□□□ 0.12
KRT6CP48668 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.82■□□□□ 0.12
KRT6CP48668 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
KRT6CP48668 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6CP48668 KRT18P34-201ENST00000488218 1270 ntBASIC15.82■□□□□ 0.12
KRT6CP48668 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6CP48668 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.82■□□□□ 0.12
KRT6CP48668 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6CP48668 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6CP48668 AL009183.1-201ENST00000603760 355 ntBASIC15.82■□□□□ 0.12
KRT6CP48668 Z83851.2-201ENST00000609564 659 ntBASIC15.82■□□□□ 0.12
KRT6CP48668 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.82■□□□□ 0.12
KRT6CP48668 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6CP48668 CDC14C-201ENST00000428251 1719 ntBASIC15.82■□□□□ 0.12
KRT6CP48668 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.82■□□□□ 0.12
KRT6CP48668 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRT6CP48668 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6CP48668 AC023824.1-201ENST00000562945 2975 ntBASIC15.81■□□□□ 0.12
KRT6CP48668 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
KRT6CP48668 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6CP48668 TPM4P1-201ENST00000436100 807 ntBASIC15.81■□□□□ 0.12
KRT6CP48668 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 AC105917.1-201ENST00000506637 2539 ntBASIC15.81■□□□□ 0.12
KRT6CP48668 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6CP48668 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6CP48668 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6CP48668 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
KRT6CP48668 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6CP48668 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6CP48668 SLC25A6P4-201ENST00000586535 553 ntBASIC15.81■□□□□ 0.12
KRT6CP48668 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
KRT6CP48668 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6CP48668 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6CP48668 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.81■□□□□ 0.12
KRT6CP48668 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 AC132872.4-202ENST00000622924 2756 ntBASIC15.81■□□□□ 0.12
KRT6CP48668 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.81■□□□□ 0.12
KRT6CP48668 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
KRT6CP48668 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRT6CP48668 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.8■□□□□ 0.12
KRT6CP48668 AC092919.2-201ENST00000623631 1645 ntBASIC15.8■□□□□ 0.12
KRT6CP48668 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT6CP48668 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KRT6CP48668 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT6CP48668 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT6CP48668 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
KRT6CP48668 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms