Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GRIA1P42261 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
GRIA1P42261 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.47■□□□□ 0.23
GRIA1P42261 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.47■□□□□ 0.23
GRIA1P42261 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 AC023274.1-201ENST00000418278 595 ntBASIC16.47■□□□□ 0.23
GRIA1P42261 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.47■□□□□ 0.23
GRIA1P42261 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
GRIA1P42261 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GRIA1P42261 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.47■□□□□ 0.23
GRIA1P42261 RNA5SP416-201ENST00000516838 111 ntBASIC16.47■□□□□ 0.23
GRIA1P42261 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.47■□□□□ 0.23
GRIA1P42261 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.47■□□□□ 0.23
GRIA1P42261 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
GRIA1P42261 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GRIA1P42261 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.47■□□□□ 0.23
GRIA1P42261 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GRIA1P42261 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.47■□□□□ 0.23
GRIA1P42261 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GRIA1P42261 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.47■□□□□ 0.23
GRIA1P42261 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GRIA1P42261 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 DBET-201ENST00000630918 3363 ntBASIC16.46■□□□□ 0.23
GRIA1P42261 AL596257.1-201ENST00000641463 2694 ntBASIC16.46■□□□□ 0.23
GRIA1P42261 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.46■□□□□ 0.23
GRIA1P42261 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GRIA1P42261 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.46■□□□□ 0.23
GRIA1P42261 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GRIA1P42261 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
GRIA1P42261 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.46■□□□□ 0.23
GRIA1P42261 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
GRIA1P42261 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.46■□□□□ 0.23
GRIA1P42261 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.46■□□□□ 0.23
GRIA1P42261 PRYP6-201ENST00000514804 343 ntBASIC16.46■□□□□ 0.23
GRIA1P42261 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
GRIA1P42261 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.46■□□□□ 0.23
GRIA1P42261 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.46■□□□□ 0.23
GRIA1P42261 AL161645.1-201ENST00000622716 1255 ntBASIC16.46■□□□□ 0.23
GRIA1P42261 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.46■□□□□ 0.23
GRIA1P42261 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.46■□□□□ 0.23
GRIA1P42261 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GRIA1P42261 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
GRIA1P42261 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.46■□□□□ 0.23
GRIA1P42261 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GRIA1P42261 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.46■□□□□ 0.23
GRIA1P42261 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
GRIA1P42261 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
GRIA1P42261 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
GRIA1P42261 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
GRIA1P42261 AC073347.1-201ENST00000421633 2643 ntBASIC16.46■□□□□ 0.22
GRIA1P42261 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
GRIA1P42261 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
GRIA1P42261 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GRIA1P42261 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
GRIA1P42261 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GRIA1P42261 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GRIA1P42261 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
GRIA1P42261 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.45■□□□□ 0.22
GRIA1P42261 FOXO1B-201ENST00000504678 1527 ntBASIC16.45■□□□□ 0.22
GRIA1P42261 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
GRIA1P42261 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GRIA1P42261 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GRIA1P42261 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GRIA1P42261 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GRIA1P42261 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GRIA1P42261 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
GRIA1P42261 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GRIA1P42261 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms