Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GDNFP39905 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GDNFP39905 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
GDNFP39905 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 AL512652.2-201ENST00000625156 1716 ntBASIC14.22□□□□□ -0.13
GDNFP39905 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 AP002414.1-201ENST00000391405 1147 ntBASIC14.22□□□□□ -0.13
GDNFP39905 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.22□□□□□ -0.13
GDNFP39905 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 SIGLEC30P-201ENST00000455569 941 ntBASIC14.22□□□□□ -0.13
GDNFP39905 POU5F1P6-201ENST00000466990 990 ntBASIC14.22□□□□□ -0.13
GDNFP39905 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
GDNFP39905 AF238378.1-201ENST00000526806 358 ntBASIC14.22□□□□□ -0.13
GDNFP39905 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.22□□□□□ -0.13
GDNFP39905 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
GDNFP39905 NKAPP1-205ENST00000585790 367 ntBASIC14.22□□□□□ -0.13
GDNFP39905 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 REXO1L6P-202ENST00000619970 1078 ntBASIC14.22□□□□□ -0.13
GDNFP39905 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
GDNFP39905 AL365209.1-201ENST00000624418 6473 ntBASIC14.22□□□□□ -0.13
GDNFP39905 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
GDNFP39905 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 CICP13-201ENST00000422015 2789 ntBASIC14.22□□□□□ -0.13
GDNFP39905 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.22□□□□□ -0.13
GDNFP39905 SNX33P1-201ENST00000592116 1762 ntBASIC14.22□□□□□ -0.13
GDNFP39905 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GDNFP39905 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.21□□□□□ -0.13
GDNFP39905 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.21□□□□□ -0.13
GDNFP39905 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.21□□□□□ -0.13
GDNFP39905 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.21□□□□□ -0.13
GDNFP39905 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
GDNFP39905 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.21□□□□□ -0.13
GDNFP39905 FGFR3P6-201ENST00000457012 610 ntBASIC14.21□□□□□ -0.13
GDNFP39905 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.21□□□□□ -0.13
GDNFP39905 SART3-203ENST00000546611 1184 ntBASIC14.21□□□□□ -0.13
GDNFP39905 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
GDNFP39905 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.21□□□□□ -0.13
GDNFP39905 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 AC008608.2-201ENST00000606089 416 ntBASIC14.21□□□□□ -0.13
GDNFP39905 AL355877.3-201ENST00000622820 899 ntBASIC14.21□□□□□ -0.13
GDNFP39905 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GDNFP39905 AL109954.1-202ENST00000564051 2148 ntBASIC14.21□□□□□ -0.13
GDNFP39905 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GDNFP39905 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDNFP39905 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDNFP39905 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GDNFP39905 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms