Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.83□□□□□ -0.35
TRGV3P03979 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRGV3P03979 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.83□□□□□ -0.35
TRGV3P03979 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.83□□□□□ -0.35
TRGV3P03979 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.83□□□□□ -0.36
TRGV3P03979 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TRGV3P03979 ADH5P3-201ENST00000433842 1137 ntBASIC12.83□□□□□ -0.36
TRGV3P03979 AC005237.2-201ENST00000434368 219 ntBASIC12.83□□□□□ -0.36
TRGV3P03979 AL592309.1-201ENST00000443127 649 ntBASIC12.83□□□□□ -0.36
TRGV3P03979 AC079140.1-201ENST00000508039 487 ntBASIC12.83□□□□□ -0.36
TRGV3P03979 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV3P03979 KRT8P48-201ENST00000515599 1220 ntBASIC12.83□□□□□ -0.36
TRGV3P03979 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV3P03979 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV3P03979 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV3P03979 AC073439.1-201ENST00000624121 1774 ntBASIC12.83□□□□□ -0.36
TRGV3P03979 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TRGV3P03979 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRGV3P03979 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRGV3P03979 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRGV3P03979 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV3P03979 UXT-AS1-201ENST00000590504 1525 ntBASIC12.83□□□□□ -0.36
TRGV3P03979 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV3P03979 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 U82695.1-201ENST00000635752 1889 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 RPS8P6-201ENST00000426177 609 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV3P03979 AC004967.1-201ENST00000453589 447 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 AC105233.2-201ENST00000523697 349 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 AF228730.5-201ENST00000530288 346 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV3P03979 AC243562.1-201ENST00000560672 389 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 SNHG9-202ENST00000564014 471 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV3P03979 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV3P03979 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV3P03979 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV3P03979 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 AC008267.7-201ENST00000624570 1194 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 AC134684.3-201ENST00000641758 218 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 AC079781.4-201ENST00000641908 219 ntBASIC12.82□□□□□ -0.36
TRGV3P03979 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV3P03979 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms