Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KRT18P48-201ENST00000434763 852 ntBASIC14.19□□□□□ -0.14
UPK1BO75841 AC069152.1-201ENST00000438030 544 ntBASIC14.19□□□□□ -0.14
UPK1BO75841 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1BO75841 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1BO75841 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1BO75841 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1BO75841 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.19□□□□□ -0.14
UPK1BO75841 RN7SL471P-201ENST00000580476 299 ntBASIC14.19□□□□□ -0.14
UPK1BO75841 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1BO75841 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.19□□□□□ -0.14
UPK1BO75841 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 AC126365.1-201ENST00000578585 1514 ntBASIC14.19□□□□□ -0.14
UPK1BO75841 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UPK1BO75841 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UPK1BO75841 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UPK1BO75841 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
UPK1BO75841 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UPK1BO75841 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.18□□□□□ -0.14
UPK1BO75841 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 NCF1B-203ENST00000435988 1254 ntBASIC14.18□□□□□ -0.14
UPK1BO75841 AC007663.1-201ENST00000438948 1240 ntBASIC14.18□□□□□ -0.14
UPK1BO75841 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.18□□□□□ -0.14
UPK1BO75841 ECEL1P2-202ENST00000465689 757 ntBASIC14.18□□□□□ -0.14
UPK1BO75841 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 CD177P1-201ENST00000606252 935 ntBASIC14.18□□□□□ -0.14
UPK1BO75841 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 AC092666.2-201ENST00000613287 246 ntBASIC14.18□□□□□ -0.14
UPK1BO75841 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.18□□□□□ -0.14
UPK1BO75841 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.18□□□□□ -0.14
UPK1BO75841 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UPK1BO75841 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UPK1BO75841 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.17□□□□□ -0.14
UPK1BO75841 COL6A4P2-202ENST00000504443 2753 ntBASIC14.17□□□□□ -0.14
UPK1BO75841 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
UPK1BO75841 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms