Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFS3O75489 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFS3O75489 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 AKAP8P1-201ENST00000434743 1349 ntBASIC16.23■□□□□ 0.19
NDUFS3O75489 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFS3O75489 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
NDUFS3O75489 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NDUFS3O75489 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 MCCD1P2-201ENST00000423228 335 ntBASIC16.23■□□□□ 0.19
NDUFS3O75489 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.23■□□□□ 0.19
NDUFS3O75489 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
NDUFS3O75489 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 PGAM5P1-201ENST00000518923 814 ntBASIC16.23■□□□□ 0.19
NDUFS3O75489 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.23■□□□□ 0.19
NDUFS3O75489 FAM86C2P-203ENST00000528684 1004 ntBASIC16.23■□□□□ 0.19
NDUFS3O75489 AL603832.2-201ENST00000566195 2125 ntBASIC16.23■□□□□ 0.19
NDUFS3O75489 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFS3O75489 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.23■□□□□ 0.19
NDUFS3O75489 AL365330.1-201ENST00000607459 531 ntBASIC16.23■□□□□ 0.19
NDUFS3O75489 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFS3O75489 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NDUFS3O75489 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS3O75489 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NDUFS3O75489 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
NDUFS3O75489 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS3O75489 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 AC022188.1-201ENST00000620960 1664 ntBASIC16.22■□□□□ 0.19
NDUFS3O75489 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NDUFS3O75489 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS3O75489 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 TFAMP1-201ENST00000412727 736 ntBASIC16.22■□□□□ 0.19
NDUFS3O75489 AL355306.1-201ENST00000415580 579 ntBASIC16.22■□□□□ 0.19
NDUFS3O75489 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFS3O75489 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
NDUFS3O75489 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS3O75489 AL589702.1-201ENST00000641229 1509 ntBASIC16.22■□□□□ 0.19
NDUFS3O75489 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS3O75489 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS3O75489 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFS3O75489 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms