Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 KRT8P39-201ENST00000396270 1433 ntBASIC15.68■□□□□ 0.1
CPNE3O75131 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE3O75131 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CPNE3O75131 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CPNE3O75131 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.67■□□□□ 0.1
CPNE3O75131 MIR4453-201ENST00000584019 89 ntBASIC15.67■□□□□ 0.1
CPNE3O75131 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 AC018529.1-201ENST00000613063 361 ntBASIC15.67■□□□□ 0.1
CPNE3O75131 AL390754.1-201ENST00000619088 582 ntBASIC15.67■□□□□ 0.1
CPNE3O75131 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CPNE3O75131 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CPNE3O75131 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.67■□□□□ 0.1
CPNE3O75131 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE3O75131 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CPNE3O75131 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE3O75131 AL671710.1-201ENST00000610245 2349 ntBASIC15.66■□□□□ 0.1
CPNE3O75131 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CPNE3O75131 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE3O75131 HLA-H-201ENST00000383620 1096 ntBASIC15.66■□□□□ 0.1
CPNE3O75131 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE3O75131 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE3O75131 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.66■□□□□ 0.1
CPNE3O75131 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.66■□□□□ 0.1
CPNE3O75131 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.66■□□□□ 0.1
CPNE3O75131 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.66■□□□□ 0.1
CPNE3O75131 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 PCDHB17P-201ENST00000539533 2393 ntBASIC15.66■□□□□ 0.1
CPNE3O75131 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CPNE3O75131 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.66■□□□□ 0.1
CPNE3O75131 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.66■□□□□ 0.1
CPNE3O75131 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CPNE3O75131 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CPNE3O75131 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
CPNE3O75131 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CPNE3O75131 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.65■□□□□ 0.1
CPNE3O75131 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE3O75131 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CPNE3O75131 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CPNE3O75131 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CPNE3O75131 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE3O75131 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE3O75131 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.65■□□□□ 0.1
CPNE3O75131 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.65■□□□□ 0.1
CPNE3O75131 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms