Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.43■□□□□ 0.06
UPK1AO00322 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK1AO00322 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 AC023157.3-201ENST00000619086 2088 ntBASIC15.42■□□□□ 0.06
UPK1AO00322 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.42■□□□□ 0.06
UPK1AO00322 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
UPK1AO00322 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
UPK1AO00322 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 AC074386.1-202ENST00000463561 864 ntBASIC15.42■□□□□ 0.06
UPK1AO00322 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.42■□□□□ 0.06
UPK1AO00322 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 AC092865.6-201ENST00000642101 219 ntBASIC15.42■□□□□ 0.06
UPK1AO00322 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UPK1AO00322 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UPK1AO00322 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UPK1AO00322 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 CROCCP1-201ENST00000426910 5675 ntBASIC15.41■□□□□ 0.06
UPK1AO00322 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK1AO00322 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UPK1AO00322 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.41■□□□□ 0.06
UPK1AO00322 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK1AO00322 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.41■□□□□ 0.06
UPK1AO00322 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.41■□□□□ 0.06
UPK1AO00322 AC068137.2-201ENST00000605408 478 ntBASIC15.41■□□□□ 0.06
UPK1AO00322 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK1AO00322 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK1AO00322 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK1AO00322 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK1AO00322 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK1AO00322 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.41■□□□□ 0.06
UPK1AO00322 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.41■□□□□ 0.06
UPK1AO00322 SSR4P1-203ENST00000599569 2260 ntBASIC15.41■□□□□ 0.06
UPK1AO00322 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms