Protein–RNA interactions for Protein: A6NCE7

MAP1LC3B2, Microtubule-associated proteins 1A/1B light chain 3 beta 2, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B2A6NCE7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AL441883.1-201ENST00000566170 1045 ntBASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 RNF126P1-202ENST00000569893 925 ntBASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AL590326.2-201ENST00000625139 305 ntBASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 PGM5P2-202ENST00000637225 1043 ntBASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AL031432.5-201ENST00000641059 760 ntBASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AC126335.2-201ENST00000623362 4637 ntBASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MAP1LC3B2A6NCE7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MAP1LC3B2A6NCE7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
MAP1LC3B2A6NCE7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 LINC00528-201ENST00000600723 2160 ntBASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 AL353801.3-201ENST00000609898 542 ntBASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 AL138966.2-201ENST00000621997 464 ntBASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.89□□□□□ -0.35
MAP1LC3B2A6NCE7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms