Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV3S1A0A5B6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PTCHD3P3-201ENST00000403073 906 ntBASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 MIR5100-201ENST00000579544 119 ntBASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 AC133561.5-201ENST00000635547 218 ntBASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 KRT8P44-201ENST00000441609 1350 ntBASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TCRBV3S1A0A5B6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TCRBV3S1A0A5B6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms