Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 HCG4-201ENST00000418983 998 ntBASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 AC063952.2-201ENST00000498792 1227 ntBASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 LINC01023-201ENST00000606054 436 ntBASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRDV1A0A1B0GX56 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AC005521.1-201ENST00000393351 872 ntBASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 IGHV3-47-201ENST00000425060 335 ntBASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AL160237.2-201ENST00000556165 472 ntBASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AC012306.2-201ENST00000609350 630 ntBASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AC007191.1-201ENST00000623179 2995 ntBASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 AL390755.1-201ENST00000623716 2027 ntBASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 LINC00528-201ENST00000600723 2160 ntBASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRDV1A0A1B0GX56 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRDV1A0A1B0GX56 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRDV1A0A1B0GX56 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRDV1A0A1B0GX56 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRDV1A0A1B0GX56 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRDV1A0A1B0GX56 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRDV1A0A1B0GX56 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRDV1A0A1B0GX56 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms