Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX49Q9Y6V7 PKD1P5-201ENST00000532415 10291 ntBASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 AL136379.1-201ENST00000623471 2642 ntBASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 CEND1P1-201ENST00000451006 455 ntBASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 AC096734.2-201ENST00000562054 433 ntBASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 AL596087.1-201ENST00000400979 1969 ntBASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX49Q9Y6V7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 RHOQP3-201ENST00000437982 621 ntBASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 AC079781.4-201ENST00000641908 219 ntBASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
DDX49Q9Y6V7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 AC063926.3-201ENST00000624734 5658 ntBASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 AC027612.4-201ENST00000605371 583 ntBASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 ELL2P1-201ENST00000413990 1906 ntBASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX49Q9Y6V7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms