Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 AC012618.2-201ENST00000428058 849 ntBASIC13.24□□□□□ -0.29
NKX6-2Q9C056 AC009947.2-201ENST00000444014 672 ntBASIC13.24□□□□□ -0.29
NKX6-2Q9C056 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 AL359736.2-201ENST00000621992 437 ntBASIC13.24□□□□□ -0.29
NKX6-2Q9C056 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NKX6-2Q9C056 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 MBLAC2-202ENST00000514906 1936 ntBASIC13.23□□□□□ -0.29
NKX6-2Q9C056 AC118758.2-201ENST00000614242 2813 ntBASIC13.23□□□□□ -0.29
NKX6-2Q9C056 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 AC107956.1-201ENST00000494359 873 ntBASIC13.23□□□□□ -0.29
NKX6-2Q9C056 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 AC026471.5-201ENST00000615068 467 ntBASIC13.23□□□□□ -0.29
NKX6-2Q9C056 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NKX6-2Q9C056 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NKX6-2Q9C056 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms