Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC020907.1-201ENST00000616460 1350 ntBASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTFDC1Q9BY42 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 AC092933.1-201ENST00000393644 945 ntBASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 BCRP2-202ENST00000447763 634 ntBASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 BCRP6-201ENST00000510112 632 ntBASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 BCRP7-201ENST00000511549 544 ntBASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 AC243562.2-201ENST00000561247 970 ntBASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 RN7SL219P-201ENST00000582872 296 ntBASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RTFDC1Q9BY42 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTFDC1Q9BY42 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RTFDC1Q9BY42 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 AC068587.3-201ENST00000526613 355 ntBASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 AC012313.1-201ENST00000593393 3059 ntBASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 UBALD1-205ENST00000590891 2641 ntBASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTFDC1Q9BY42 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 PTP4A1P2-201ENST00000546033 454 ntBASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.5■□□□□ 0.71
RTFDC1Q9BY42 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RTFDC1Q9BY42 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms