Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TRAF4Q9BUZ4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AC023157.3-201ENST00000619086 2088 ntBASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AL513480.1-201ENST00000451731 511 ntBASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AP000344.2-201ENST00000512987 629 ntBASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AP002472.1-201ENST00000577490 586 ntBASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 ACTL9-202ENST00000612068 1252 ntBASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAF4Q9BUZ4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 CICP14-201ENST00000629111 2732 ntBASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAF4Q9BUZ4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms