Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SHANK2-AS3Q9BTD1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 AC073347.1-201ENST00000421633 2643 ntBASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 FAM197Y8-203ENST00000450145 560 ntBASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 AC018712.1-201ENST00000455767 687 ntBASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 TP73-AS1-207ENST00000624167 988 ntBASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SHANK2-AS3Q9BTD1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.54□□□□□ -0.4
SHANK2-AS3Q9BTD1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms