Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ABCA3Q99758 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ABCA3Q99758 AL354989.2-201ENST00000435838 1540 ntBASIC21.13■□□□□ 0.97
ABCA3Q99758 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 AC078925.2-201ENST00000624013 1973 ntBASIC21.13■□□□□ 0.97
ABCA3Q99758 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
ABCA3Q99758 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCA3Q99758 AC079178.1-201ENST00000420915 656 ntBASIC21.13■□□□□ 0.97
ABCA3Q99758 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCA3Q99758 FTLP10-202ENST00000505798 471 ntBASIC21.13■□□□□ 0.97
ABCA3Q99758 KRT18P25-201ENST00000508931 1278 ntBASIC21.13■□□□□ 0.97
ABCA3Q99758 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 AC044849.1-201ENST00000519737 1188 ntBASIC21.13■□□□□ 0.97
ABCA3Q99758 AC005730.2-201ENST00000564549 1184 ntBASIC21.13■□□□□ 0.97
ABCA3Q99758 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
ABCA3Q99758 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCA3Q99758 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCA3Q99758 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCA3Q99758 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC21.12■□□□□ 0.97
ABCA3Q99758 AC016700.1-201ENST00000429424 312 ntBASIC21.12■□□□□ 0.97
ABCA3Q99758 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 GAPDHP40-201ENST00000505218 1006 ntBASIC21.12■□□□□ 0.97
ABCA3Q99758 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.12■□□□□ 0.97
ABCA3Q99758 AC018635.2-201ENST00000608625 364 ntBASIC21.12■□□□□ 0.97
ABCA3Q99758 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC21.12■□□□□ 0.97
ABCA3Q99758 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCA3Q99758 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCA3Q99758 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 TISP43-201ENST00000409793 538 ntTSL 4 BASIC21.12■□□□□ 0.97
ABCA3Q99758 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC21.12■□□□□ 0.97
ABCA3Q99758 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC21.12■□□□□ 0.97
ABCA3Q99758 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.12■□□□□ 0.97
ABCA3Q99758 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.12■□□□□ 0.97
ABCA3Q99758 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC21.12■□□□□ 0.97
ABCA3Q99758 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC21.12■□□□□ 0.97
ABCA3Q99758 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCA3Q99758 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
ABCA3Q99758 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC21.12■□□□□ 0.97
ABCA3Q99758 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCA3Q99758 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 NOC2LP2-201ENST00000407594 1944 ntBASIC21.11■□□□□ 0.97
ABCA3Q99758 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 AC005915.1-201ENST00000624912 2018 ntBASIC21.11■□□□□ 0.97
ABCA3Q99758 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCA3Q99758 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ABCA3Q99758 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 KRT8P35-201ENST00000483942 1338 ntBASIC21.11■□□□□ 0.97
ABCA3Q99758 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 FGFR3P5-201ENST00000564496 886 ntBASIC21.11■□□□□ 0.97
ABCA3Q99758 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.11■□□□□ 0.97
ABCA3Q99758 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
ABCA3Q99758 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.11■□□□□ 0.97
ABCA3Q99758 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCA3Q99758 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCA3Q99758 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC21.1■□□□□ 0.97
ABCA3Q99758 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.1■□□□□ 0.97
ABCA3Q99758 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.1■□□□□ 0.97
ABCA3Q99758 RERG-205ENST00000537647 935 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCA3Q99758 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ABCA3Q99758 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCA3Q99758 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCA3Q99758 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCA3Q99758 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms