Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AL662844.4-201ENST00000606367 2838 ntBASIC21.68■■□□□ 1.06
CFAP53Q96M91 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 AC093214.1-201ENST00000511688 1107 ntBASIC21.68■■□□□ 1.06
CFAP53Q96M91 AL079307.3-201ENST00000556114 283 ntBASIC21.68■■□□□ 1.06
CFAP53Q96M91 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 AL390754.1-201ENST00000619088 582 ntBASIC21.68■■□□□ 1.06
CFAP53Q96M91 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC21.68■■□□□ 1.06
CFAP53Q96M91 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CFAP53Q96M91 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 BASP1P1-201ENST00000430708 665 ntBASIC21.67■■□□□ 1.06
CFAP53Q96M91 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.67■■□□□ 1.06
CFAP53Q96M91 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CFAP53Q96M91 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP53Q96M91 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP53Q96M91 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP53Q96M91 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
CFAP53Q96M91 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CFAP53Q96M91 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP53Q96M91 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CFAP53Q96M91 HAUS4P1-201ENST00000406739 1145 ntBASIC21.66■■□□□ 1.06
CFAP53Q96M91 HMGN1P19-201ENST00000436976 333 ntBASIC21.66■■□□□ 1.06
CFAP53Q96M91 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.66■■□□□ 1.06
CFAP53Q96M91 AC243562.2-201ENST00000561247 970 ntBASIC21.66■■□□□ 1.06
CFAP53Q96M91 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.66■■□□□ 1.06
CFAP53Q96M91 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP53Q96M91 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP53Q96M91 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.66■■□□□ 1.06
CFAP53Q96M91 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CFAP53Q96M91 AL118508.1-201ENST00000613502 2345 ntBASIC21.66■■□□□ 1.06
CFAP53Q96M91 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 STK24-203ENST00000397517 4578 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 MIR648-201ENST00000385046 94 ntBASIC21.65■■□□□ 1.06
CFAP53Q96M91 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 RPL37AP1-201ENST00000412502 279 ntBASIC21.65■■□□□ 1.06
CFAP53Q96M91 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 AC241585.1-201ENST00000433527 519 ntBASIC21.65■■□□□ 1.06
CFAP53Q96M91 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 RNA5SP421-201ENST00000516864 134 ntBASIC21.65■■□□□ 1.06
CFAP53Q96M91 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 AL136982.4-201ENST00000437689 1740 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms