Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.13■□□□□ 0.33
TTC16Q8NEE8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.12■□□□□ 0.33
TTC16Q8NEE8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.12■□□□□ 0.33
TTC16Q8NEE8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 AC022211.2-201ENST00000585075 2527 ntBASIC17.12■□□□□ 0.33
TTC16Q8NEE8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 AL603756.1-201ENST00000606511 2163 ntBASIC17.12■□□□□ 0.33
TTC16Q8NEE8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 KRT8P39-201ENST00000396270 1433 ntBASIC17.12■□□□□ 0.33
TTC16Q8NEE8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC16Q8NEE8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AC002472.2-201ENST00000442739 958 ntBASIC17.11■□□□□ 0.33
TTC16Q8NEE8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 RN7SL204P-201ENST00000582831 262 ntBASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AL158211.3-201ENST00000607385 239 ntBASIC17.11■□□□□ 0.33
TTC16Q8NEE8 SPTSSB-204ENST00000617024 1292 ntBASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AC073592.8-201ENST00000624126 511 ntBASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AC067930.6-201ENST00000623257 4947 ntBASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC16Q8NEE8 AP001094.4-201ENST00000579008 2176 ntBASIC17.11■□□□□ 0.33
TTC16Q8NEE8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.1■□□□□ 0.33
TTC16Q8NEE8 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms