Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 AC105020.1-201ENST00000435356 2205 ntBASIC16.55■□□□□ 0.24
CHPFQ8IZ52 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CHPFQ8IZ52 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 AC007541.1-201ENST00000570282 1469 ntBASIC16.54■□□□□ 0.24
CHPFQ8IZ52 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 GGT4P-201ENST00000623672 1708 ntBASIC16.54■□□□□ 0.24
CHPFQ8IZ52 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 PCDHB19P-201ENST00000570871 2371 ntBASIC16.54■□□□□ 0.24
CHPFQ8IZ52 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 AC135586.1-201ENST00000539323 574 ntBASIC16.54■□□□□ 0.24
CHPFQ8IZ52 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHPFQ8IZ52 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 GK-202ENST00000378941 458 ntTSL 3 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 AL596325.1-201ENST00000563991 1082 ntBASIC16.53■□□□□ 0.24
CHPFQ8IZ52 AC061975.2-201ENST00000581722 295 ntBASIC16.53■□□□□ 0.24
CHPFQ8IZ52 AL132655.2-201ENST00000596276 594 ntBASIC16.53■□□□□ 0.24
CHPFQ8IZ52 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.53■□□□□ 0.24
CHPFQ8IZ52 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.53■□□□□ 0.24
CHPFQ8IZ52 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.53■□□□□ 0.24
CHPFQ8IZ52 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.53■□□□□ 0.24
CHPFQ8IZ52 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHPFQ8IZ52 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms