Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 HMGA1P7-201ENST00000406908 502 ntBASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 AC245100.5-201ENST00000452108 331 ntBASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 AF238378.1-201ENST00000526806 358 ntBASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 AL031055.1-201ENST00000606362 631 ntBASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 MIR1199-201ENST00000621445 119 ntBASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 TNRC18P2-201ENST00000417666 2714 ntBASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC170Q8IYT3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 AC093724.1-201ENST00000448659 1027 ntBASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC170Q8IYT3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 RPS2P1-201ENST00000434010 821 ntBASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 KRT18P35-201ENST00000510488 1269 ntBASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 LINC01711-201ENST00000598340 967 ntBASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC170Q8IYT3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms