Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 AC069262.1-201ENST00000539058 672 ntBASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 LINC00628-201ENST00000628516 1289 ntBASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 AP005117.1-202ENST00000581724 1908 ntBASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.57■□□□□ 0.4
C12orf56Q8IXR9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 AL035456.1-201ENST00000456064 1369 ntBASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 TSEN15P1-201ENST00000423257 515 ntBASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 AC109322.1-201ENST00000524499 1264 ntBASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 AC015911.4-201ENST00000588022 1070 ntBASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 AL133215.2-201ENST00000609242 977 ntBASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
C12orf56Q8IXR9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 SPDYE17-201ENST00000412399 783 ntBASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.55■□□□□ 0.4
C12orf56Q8IXR9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 AC007950.2-201ENST00000615045 2347 ntBASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
C12orf56Q8IXR9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms